Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015949774.1_cds_XP_016490538.1_80950
CDS Infomation

[gene=LOC107810291] [db_xref=GeneID:107810291] [protein=protein CPR-5-like] [protein_id=XP_016490538.1] [location=join(100620..100982,103810..103866,104139..104174,104292..105047,105825..106364)] [gbkey=CDS]
Sequence

ATGGACCACCACCCTCTATCTCAACCCGTGGATCCACCGCCGGAGCCCACTCGCGACACC
ATGGCTACCGAAATTCCACCGGAATCTTCAAACTCCGGCGGCGTTATGAAGAATAAAACG
AAGAAGAAGAAAAAGAAGAATAAAGCGTGCGTCAATGATCCCTTTGACCCTCATGCTTCT
TCCGCTGCCTCCTATTCATCATCATCTTGTTCTACGACGTGGTTTTCTCAAAGGGGTATT
AGGGTTTCGGCAAGTCGTCGGAACCCTAGAGTGGTAATTGGGGCCGGCAGGCAGAAAAGT
GATGAGAATGTTGAAGCCCTTGCTCTCCCTCTCGGCATGTCTATTGCTGCTGTTCTTGCT
CAGGTTTTGGAAAGGAAAGATGCAGCCGGAGAAAAGATATCTGTGGATCACCTCTCAGAG
ATTTGTACTTTGGCTGTCCGAGAGTCTTTGGCCAATGTCTTTGGTGACCAGTTTGAGTCT
TTCGTGAGGAACTTTGAGAAATCATTTCGTAGTACATTGATGACTCTCAGATTAATCAGT
GAGTCCTCTATGAACGATGGAGTACAGCAAAATCATTGTGCAGCGAGGACTTCTGTCTCA
GAAAGATCTGTGCCTTTGATTTCCAACAGACTAGAAAATCTTACATGTGATCCTGACTTC
AGCAAGTTTCAATCGGAGTCATGTCAGCAGAGTGCCATATCAGATAACGAACTGAGCAAT
CAAGAAGAGAGAAGTGAAGGTACATGTCTTGAATCAATAGGTCGGCAGCTTACCCTCTAT
GATAGGCAAGTAAGGCAGCAATTGGCTTCTGTTTCTTCAAGCATGATTTCATCCAATACA
GAGATTAATCAATCTGTGAGTAGCACTTTGGAAAGATCTGTCATGGAGCAAGCTAGGTCG
AATGACCTCAAGACATTTGAGATTGGTCTTACAATGAGGAAGTTGCAACTTAAAGAAAGG
CAGCTGTCTCTCAGTTCTGATGCGAACCTTTTGGAGAGGGTCAAACTTTCATTTGGAATC
TCTAAGACGTCCTTCAAAGCCGAAAAGTTTAAAAATCAAGTAGAAGACTTAAAACATGCT
GAGTTGCTTAAAACATGTATAGACTGCCTTGTTGCTGGTTTATTTATCATGTTGGCGTGT
CTTGGATATGGAACTTATGTTTTCTCTCACAAAAGAATTACTGAAGCTACAGCATCCTGC
ACACCTGCCATGGAGTACAAGTCGTCTTGGTGGATGCCAAAATCAATGTCAACTTTTAAT
TCAGGACTGCAACTTCTATGGTGTCAAGTTCAAGTTCTCAGTCGCATGCTATTTGGTGCG
CTCATGATATTGGTTATAGCCTATTTACTACTCCAACGCTCTGCAATTTCAAACCAGACG
ATGCCAGTTACTTTCATTCTGTTGCTGTTGGGAGTTGGCTGCGGTTTTGCAGGGAAGTTT
TGTATCGACACCCTGGGGGGCAGCGGATATCATTGGTTAATTTATTGGGAGACTCTGTGC
TTGCTACATTTCTTTTCGAATGTCTGTATCTCGACTTTGTTCCTGATCCTTAACGAACCT
GTCACTGTGTCAGAAAAGAGCACGAGGGATACAAGATTTCCATACTGGATGAGGAGATCT
GTGTTTTATACCACATTACTTCTTTTTCTCCCGTTATTATGTGGTATGATGCCTTTTGCT
GGCCCTAGTGAGTGGAAGGATCACTTTTCTTCACTGGTTCTGGACGCTTTTATAACTCCA
GTTGAATACTAA

Peptide Sequence

PEP ID

XP_016490538.1
PEP Infomation

PREDICTED: protein CPR-5-like [Nicotiana tabacum]
Sequence

MDHHPLSQPVDPPPEPTRDTMATEIPPESSNSGGVMKNKTKKKKKKNKACVNDPFDPHAS
SAASYSSSSCSTTWFSQRGIRVSASRRNPRVVIGAGRQKSDENVEALALPLGMSIAAVLA
QVLERKDAAGEKISVDHLSEICTLAVRESLANVFGDQFESFVRNFEKSFRSTLMTLRLIS
ESSMNDGVQQNHCAARTSVSERSVPLISNRLENLTCDPDFSKFQSESCQQSAISDNELSN
QEERSEGTCLESIGRQLTLYDRQVRQQLASVSSSMISSNTEINQSVSSTLERSVMEQARS
NDLKTFEIGLTMRKLQLKERQLSLSSDANLLERVKLSFGISKTSFKAEKFKNQVEDLKHA
ELLKTCIDCLVAGLFIMLACLGYGTYVFSHKRITEATASCTPAMEYKSSWWMPKSMSTFN
SGLQLLWCQVQVLSRMLFGALMILVIAYLLLQRSAISNQTMPVTFILLLLGVGCGFAGKF
CIDTLGGSGYHWLIYWETLCLLHFFSNVCISTLFLILNEPVTVSEKSTRDTRFPYWMRRS
VFYTTLLLFLPLLCGMMPFAGPSEWKDHFSSLVLDAFITPVEY

Transcript Sequence

Gene sequence data has not been registered.